University of Göttingen - Institute for Numerical and Applied Mathematics
Research group for Mathematical Signal and Image Processing


OCT-let: Designing an Optimum Sparse Representation for Ophthalmic Optical

Coherence Tomography Image Analysis



(2021 - 2023)

OCT image
Georg Forster Research Fellowship of the Humboldt Foundation for Professor Hossein Rabbani (Isfahan University of Medical Sciences)


The research program proposed in this application aims to analyze Optical Coherence Tomography (OCT) images using sparse representations in suitable dictionaries. OCT is a new imaging technique to provide information about cross-sectional structures of an object. The approach of OCT can be thought of similarly as ultrasound imaging, but the sound profiles are replaced by coherent light beams. One of the most significant applications of OCT in clinical application is in the field of ophthalmology and has become an important tool to obtain detailed images from within the retina. An important factor that limits the effective image resolution is the occurring speckle pattern. It has two components, the signal-carrying speckle and the signal degrading speckle. The resulting effect in the OCT images is a grainy structure which blurs structural details. In order to improve the image quality, we want on the one hand suppress the speckle noise, and on the other hand may take advantage of the speckle statistics in order to improve the small image structures. This approach however bears the risk of misinterpretation, in retinal images speckles can mimic small structural features like capillaries. Therefore, special methods for noise reduction need to be developed for OCT images that take into account the a priori knowledge on the occurring speckle noise. These noise reduction techniques have then to be combined with OCT classification, segmentation and restoration methods.



Principal investigator: Hossein Rabbani, Gerlind Plonka-Hoch


Corresponding publications
CircWaveDL: Modeling of Optical Coherence Tomography Images Based on a New Supervised Tensor-based Dictionary Learning for Classification of Macular Abnormalities.
Roya Arian, Aliraza Vard, Rahele Kafieh, Gerlind Plonka, Hossein Rabbani
University of Göttingen, Institute for Numerical and Applied Mathematics, 2023,
Application of deep dictionary learning and predefined filters for classification of retinal optical coherence tomography images.
Zahra Baharlouei, Fariba Shaker, Gerlind Plonka, Hossein Rabbani
University of Göttingen, Institute for Numerical and Applied Mathematics, 2023,
X-let’s atom combinations for modeling and denoising of OCT images by modified morphological component analysis.
Raha Razavi, Gerlind Plonka, Hossein Rabbani
IEEE Transactions on Medical Imaging 43(2), 760-770, 2024, paper online, DOI: 10.1109/TMI.2023.3320977.
A New Convolutional Neural Network Based on Combination of Circlets and Wavelets for Macular OCT Classification.
Roya Arian, Aliraza Vard, Rahele Kafieh, Gerlind Plonka, Hossein Rabbani
Scientific Reports 13, 22582, 2023, open access, DOI: 10.1038/s41598-023-50164-7.
Wavelet scattering transform application in classification of retinal abnormalities using OCT images.
Zahra Baharlouei, Gerlind Plonka, Hossein Rabbani
Scientific Reports 13, 19013, 2023, open access, DOI: 10.1038/s41598-023-46200-1.
Combining Non-Data-Adaptive Transforms for OCT Image Denoising by Iterative Basis Pursuit
Raha Razavi, Hossein Rabbani, Gerlind Plonka
2022 IEEE International Conference on Image Processing (ICIP), pp. 2351-2355, 2022, DOI: 10.1109/ICIP46576.2022.9897319.
Detection of Retinal Abnormalities in OCT Images Using Wavelet Scattering Network
Zahra Baharlouei, Hossein Rabbani, Gerlind Plonka
44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), pp. 3862-3865, 2022, DOI: 10.1109/EMBC48229.2022.9871989.
Automatic Classification of Macular Diseases from OCT Images Using CNN Guided with Edge Convolutional Layer
Ebrahim Nasr Esfahani, Parisa Ghaderi Daneshmand, Hossein Rabbani, Gerlind Plonka
44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), pp. 3858-3861, 2022, DOI: 10.1109/EMBC48229.2022.9871322.
Reconstruction of Connected Digital Lines Based on Constrained Regularization.
Mojtaba Lashgari, Hossein Rabbani, Gerlind Plonka, Ivan Selesnick
IEEE Transactions on Image Processing 31, 5613-5628, 2022,
Retinal Optical Coherence Tomography image analysis by Restricted Boltzmann Machine.
Mansooreh Ezhet, Gerlind Plonka, Hossein Rabbani
Biomedical Optics Express 13(9), 4539-4558, 2022,
Statistical modeling of retinal optical coherence tomography using the Weibull mixture model
Sahar Jordani, Zahra Amini, Gerlind Plonka, Hossein Rabbani
Biomedical Optics Express 12(9), 5470-5488, 2021, open access https://doi.org/10.1364/BOE.430800.



Research Group for Mathematical Signal and Image Processing

Institute for Numerical and Applied Mathematics
Lotzestr. 16-18
37083 Göttingen